LivestockExp: a re- and co-analysis platform for exploration of livestock gene expression and alternative splicing
Introduction
LivestockExp is a re- and co-analysis platform for users to explore gene expression and alternative splicing. It includes more than 43,000 uniformly processed publicly available RNA-seq samples from 14 species across 6 orders. The gene expression and alternative splicing profiles can be conveniently queried and exhibited visually. Users can flexibly customize experimental groups to perform differential expression analysis, specific expression eanalysis and co-expression analysis. Moreover, users can investigate the conservation of gene expression between different species. A suited of data visalization tools and comprehensive links with external databases allow users to efficiently explore the results and gain insights.
Distribution of species
Table. Summary of RNA-seq samples collected in the platform